Job Description P03014 Confidence 99.82% Date Thu Jan 5 10:57:52 GMT 2012 Rank 13 Aligned Residues 127 % Identity 23% Template c3lhkA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative dna binding protein mj0014; PDBTitle: crystal structure of putative dna binding protein from2 methanocaldococcus jannaschii. Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure														.	.														.	.	.	.	.																														.	.
Query SS confidence														.	.														.	.	.	.	.																														.	.
Query Sequence		L	I	G	Y	V	R	V	S	T	N	D	Q	.	.	N	T	D	L	Q	R	N	A	L	N	C	A	G	.	.	.	.	.	C	E	L	I	F	E	D	K	I	S	G	T	K	S	E	R	P	G	L	K	K	L	L	R	T	L	S	A	G	.	.	D	T	L	V	V	W	K	L	D	R	L	G	R	S	M	R	H
Query Conservation														.	.														.	.	.	.	.																														.	.
Alig confidence														.	.														.	.	.	.	.																														.	.
Template Conservation
Template Sequence		I	I	G	Y	A	R	V	S	F	N	A	Q	K	D	D	L	E	R	Q	I	Q	L	I	K	S	Y	A	E	E	N	G	W	D	I	Q	I	L	K	D	I	G	S	G	L	N	E	K	R	K	N	Y	K	K	L	L	K	X	V	X	N	R	K	V	E	K	V	I	I	A	Y	P	D	R	L	T	R	F	G	F	E
Template Known Secondary structure									S	S	G	G	G																		T	T										S		T	T		T	T													T	T								S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	V	L	V	E	E	L	R	E	R	G	I	N	F	R	S	L	T	D	S	I	D	T	S	T	P	M	G	R	F	F	F	H	V	M	G	A	L	A	E	M	E	R	E	L	I	V	E	R	T	K	A	G	L	E	T	A	R	A
Query Conservation
Alig confidence		.	.																						.	.
Template Conservation		.	.																						.	.
Template Sequence		.	.	T	L	K	E	F	F	K	S	Y	G	T	E	I	V	I	I	N	K	K	H	K	.	.	T	P	Q	E	E	L	V	E	D	L	I	T	I	V	S	H	F	A	G	K	L	Y	G	X	H	S	H	K	Y	K	K	L	T	K	T
Template Known Secondary structure		.	.									T	T						S		S	S			.	.																								T	T
Template Predicted Secondary structure		.	.																						.	.
Template SS confidence
				144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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