Job Description P03014 Confidence 24.27% Date Thu Jan 5 10:57:52 GMT 2012 Rank 359 Aligned Residues 33 % Identity 15% Template c3iydF_ PDB info PDB header:transcription/dna Chain: F: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex Resolution 19.80 Å

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		145	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		P	E	Q	W	A	Q	A	G	R	L	I	A	.	.	.	.	.	A	G	T	P	R	Q	K	V	A	I	I	Y	D	V	G	V	S	T	L	Y	K
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.
Template Conservation
Template Sequence		T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	N	T	D	H	T	L	E	E	V	G	K	Q	F	D	V	T	R	E	R	I	R	Q
Template Known Secondary structure														T	S	S	S					S	T	T	G	G	G	T	T	T	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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