Job Description P03014 Confidence 99.82% Date Thu Jan 5 10:57:52 GMT 2012 Rank 12 Aligned Residues 116 % Identity 41% Template c3bvpB_ PDB info PDB header:recombination Chain: B: PDB Molecule:tp901-1 integrase; PDBTitle: crystal structure of the n-terminal catalytic domain of tp901-12 integrase Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																														.	.
Query SS confidence																										.	.	.	.	.	.	.																														.	.
Query Sequence		I	G	Y	V	R	V	S	T	N	D	Q	N	T	D	L	Q	R	N	A	L	N	C	A	G	.	.	.	.	.	.	.	C	E	L	I	F	E	D	K	I	S	G	T	K	S	E	R	P	G	L	K	K	L	L	R	T	L	S	A	G	.	.	D	T	L	V	V	W	K	L	D	R	L	G	R	S	M	R	H	L
Query Conservation																										.	.	.	.	.	.	.																														.	.
Alig confidence											.															.	.	.	.	.	.	.																														.	.
Template Conservation											.
Template Sequence		A	I	Y	T	R	V	S	T	G	.	F	S	I	D	E	Q	I	D	R	L	T	K	Y	A	E	A	M	G	W	Q	V	S	D	T	Y	T	D	A	G	F	S	G	A	K	L	E	R	P	A	M	Q	R	L	I	N	D	I	E	N	K	A	F	D	T	V	L	V	Y	K	L	D	R	L	S	R	S	V	R	D	T
Template Known Secondary structure											.																		T											T			S	S	S	S												G	G	G	T			S					S	S						S
Template Predicted Secondary structure											.
Template SS confidence
		6	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		V	V	L	V	E	E	L	R	E	R	G	.	I	N	F	R	S	L	T	D	S	I	D	T	S	T	P	M	G	R	F	F	F	H	V	M	G	A	L	A	E	M	E	R	E	L	I
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		L	Y	L	V	K	D	V	F	T	K	N	K	I	D	F	I	S	L	N	E	S	I	D	T	S	S	A	M	G	S	L	F	L	T	I	L	S	A	I	N	E	F	E	R	E	L	E
Template Known Secondary structure								T	T	G	G	G	T						T	T	T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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