Job Description P03014 Confidence 94.56% Date Thu Jan 5 10:57:52 GMT 2012 Rank 37 Aligned Residues 67 % Identity 10% Template c1h0mD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:transcriptional activator protein trar; PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna Resolution 3.0 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	E	L	I	V	E	R	T	K	A	G	L	E	T	A	R	A	Q	G	R	I	G	G	R	R	P	K	L	T	P	E	Q	W	A	Q	A	G	R	L	I	A	A	G	T	P	R	Q	K	V	A	I	I	Y	D	V	G	V	S	T	L	Y	K	R	F	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	A	A	A	A	T	I	G	Q	I	H	A	R	I	S	F	L	R	T	T	P	T	A	E	D	A	A	W	L	D	P	K	E	A	T	Y	L	R	W	I	A	V	G	K	T	X	E	E	I	A	D	V	E	G	V	K	Y	N	S	V	R	V	K	L	R	E
Template Known Secondary structure																		T	T	T				S		B																	T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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