Job Description P26365 Confidence 13.66% Date Thu Jan 5 11:42:53 GMT 2012 Rank 85 Aligned Residues 127 % Identity 10% Template c3na6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:succinylglutamate desuccinylase/aspartoacylase; PDBTitle: crystal structure of a succinylglutamate desuccinylase (tm1040_2694)2 from silicibacter sp. tm1040 at 2.00 a resolution Resolution 2.00 Å

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		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	N	F	L	V	S	I	H	A	D	A	A	P	N	R	S	A	T	G	A	S	V	W	V	L	S	N	R	R	A	N	S	E	M	A	S	W	L	E	Q	H	E	K	Q	S	E	L	L	G	G	A	G	D	V	L	A	N	S	Q	S	D	P	Y	L	S	Q	A	V	L	D	L	Q	F	G	H	S	Q	R	V
Query Conservation
Alig confidence														.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Template Sequence		X	A	D	V	A	V	D	F	H	S	G	G	.	.	.	.	.	.	K	T	L	D	F	V	P	F	A	A	A	H	I	L	E	D	K	V	L	Q	D	A	C	F	A	A	X	Q	A	F	N	A	P	Y	S	V	Q	L	L	E	I	D	S	E	G	X	Y	D	T	A	V	E	E	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G		S										.	.	.	.	.	.	T	T													S																		S								T	T		T	T								T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		G	Y	D	V	A	T	S	M	I	S	Q	L	Q	R	I	G	E	I	H	K	R	R	P	E	H	A	S	L	G	V	L	R	S	P	D	I	P	S	V	L	V	E	T	G	F	I	S	N	N	S	E	E	R	L	L	A	S	D	D	Y	Q	Q	Q	L	A	E	A	I	Y	K	G	L	R	N	Y	.	.	F	L	A
Query Conservation																																																																													.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																									.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	G	K	V	L	V	T	T	E	L	G	.	.	.	.	.	.	.	G	G	G	X	S	T	A	R	S	N	A	I	A	K	K	G	L	R	N	V	L	I	H	F	G	I	L	Q	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T										.	.	.	.	.	.	.		T	T																					T	T	S	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template SS confidence
																																			201	.	.	.	.	.	.	.	.	210	.								.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	M	Q	S	A	P	Q	G	A	T	A	Q	T	A	S	T	V	T	T	P	D	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	X	Q	I	D	P	S	V	T	L	D	X	P	D	G	D	C	Y	L	F	S	E	H	D
Template Known Secondary structure											B					S							S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions