Job Description P26365 Confidence 32.81% Date Thu Jan 5 11:42:53 GMT 2012 Rank 22 Aligned Residues 119 % Identity 16% Template c3l2nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase m14, carboxypeptidase a; PDBTitle: crystal structure of putative carboxypeptidase a (yp_562911.1) from2 shewanella denitrificans os-217 at 2.39 a resolution Resolution 2.39 Å

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		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	A	R	K	Q	N	A	N	F	L	V	S	I	H	A	D	A	A	P	N	R	S	A	T	G	A	S	V	W	V	L	S	N	R	R	A	N	S	E	M	A	S	W	L	E	Q	H	E	K	Q	S	E	L	L	G	G	A	G	D	V	L	A	N	S	Q	S	D	P	Y	L	S	Q	A	V	L	D	L	Q	F
Query Conservation
Alig confidence																				.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	X	H	E	T	G	V	D	L	F	Y	D	V	H	G	D	E	.	.	.	.	G	L	P	Y	V	F	L	A	G	C	E	G	I	P	N	Y	S	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure										S									S	.	.	.	.	S		S	S	B						T	T	S	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.																																							.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.						.	.	.	.	.	380	.	.	.	.	.			.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.												.	.
Query SS confidence																																										.	.	.	.	.												.	.
Query Sequence		G	H	S	Q	R	V	G	Y	D	V	A	T	S	M	I	S	Q	L	Q	R	I	G	E	I	H	K	R	R	P	E	H	A	S	L	G	V	L	R	S	P	.	.	.	.	.	D	I	P	S	V	L	V	E	T	G	F	.	.	I	S	N	N	S	E	E	R	L	L	A	S	D	D	Y	Q	Q	Q	L	A	E	A
Query Conservation																																										.	.	.	.	.												.	.
Alig confidence																																										.	.	.	.	.												.	.
Template Conservation
Template Sequence		A	S	L	Q	Q	D	F	V	A	A	L	S	L	A	S	A	D	F	Q	T	E	F	G	Y	D	K	D	E	P	G	K	A	N	L	T	V	A	C	N	W	V	A	N	T	F	K	C	L	S	N	T	L	E	X	P	F	K	D	N	A	N	L	A	D	P	F	Q	G	W	S	P	E	R	S	V	Y	F	G	E	A
Template Known Secondary structure																	T	T	B		S	S	S	S						T	T				T	T	S										T										S	S			G	G	G			T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		408	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	K	G	L	R	N	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	I	A	X	R	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions