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Job DescriptionP26365
Confidence77.24%DateThu Jan 5 11:42:53 GMT 2012
Rank10Aligned Residues105
% Identity19%Templatec2qvpC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative metallopeptidase (sama_0725) from2 shewanella amazonensis sb2b at 2.00 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190......... 200.........210.........220.........230......... 240.........250...
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Query Sequence  TANTGDKIIIAIDAG. HGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDDPMFKGV. . . . . . . . . . LTRDGDYFISVMGR
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Template Sequence  PGQKAGLPNLLISAGFHGEESAG. . . . . . . . . PWGLLHFLSQLDGELFKRVNLSVLPLVNPTGFAKGHRFNELGENPNRG
Template Known Secondary structure  SS

TTS

SSTT
T.........T

SGGGGS


S
T
SS
TTS

TTS
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   58.60.........70.........80 .........90.........100.........110.........120........
 
   254.....260.........270.........280.........290.........300..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . SDVARKQNANFLVSIHADAAPNRSATGASVWVLSNRRANSEMASWLEQH
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Template Sequence  FFIENGKAKPGADTSAEGRILLEHAHLLQVASRDGILTCHEDV. . . . LXTDTYVYTFEPSQAPGRFSHSLRDA
Template Known Secondary structure 
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TTTTT....T
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   129130.........140.........150.........160.........170. ........180.........190.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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