Return to main results Retrieve Phyre Job Id

Job DescriptionP30979
Confidence99.70%DateThu Jan 5 11:46:51 GMT 2012
Rank18Aligned Residues199
% Identity16%Templated2esna2
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.........140.........150.........160.........170....... ..180........
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Query Sequence  DKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNR. . . . . TVQHHVLFTDN
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Template Sequence  QSQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAERKLSVEALASGRIDFALGYDEEHERLPEGIQAHDWFADR
Template Known Secondary structure  T




STT


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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   189190.........200.........210.........220.........230.........240.........250.........260........
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Query Sequence  MVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFY
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Template Sequence  YVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTDFLLTAPRHAA
Template Known Secondary structure  SS
TT
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   176...180.........190.........200.........210.........220.........230.........240.........250.....
 
   269270.........280.........290.........300.........310.....
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Query Sequence  NLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRN
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Template Sequence  RALAEAAGLALYPAPF. DIPPYVLRLYSHVQG. . RDAHAWMIGQLKG
Template Known Secondary structure  T

SS.






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   256...260.........270. ........280...... ...290.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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