Job Description P30979 Confidence 86.46% Date Thu Jan 5 11:46:51 GMT 2012 Rank 198 Aligned Residues 80 % Identity 13% Template d1yyva1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain HxlR-like Resolution 2.35

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.
Query Sequence		L	N	L	L	T	I	F	E	A	V	Y	V	H	K	G	I	V	N	A	A	K	V	L	N	L	T	P	S	A	I	S	Q	S	I	Q	K	L	R	V	I	F	P	D	P	L	F	I	R	K	G	Q	G	.	.	.	.	.	.	.	V	T	P	T	A	F	A	M	H	L	H	E	Y	I	S	Q	G	L	E	S	I
Query Conservation																																																						.	.	.	.	.	.	.
Alig confidence																							.																			.	.	.										.	.	.	.	.	.	.													.
Template Conservation																							.																			.	.	.																													.
Template Sequence		W	G	V	L	I	L	V	A	L	R	D	G	T	H	R	F	S	D	L	R	R	.	X	G	G	V	S	E	X	L	A	Q	S	L	Q	A	L	E	Q	D	.	.	.	G	F	L	N	R	V	S	Y	P	V	V	P	P	H	V	E	Y	S	L	T	P	L	G	E	Q	V	S	D	.	V	A	A	L	A	D	W	I
Template Known Secondary structure										G	G	G											.		T	T																.	.	.	T									S	S	S																	.
Template Predicted Secondary structure																							.																			.	.	.																													.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	A	L	D	I	E	G	S	Y	D	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	N	L	P	Q	V	L	A	Q	R	E
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions