Return to main results Retrieve Phyre Job Id

Job DescriptionP30979
Confidence99.76%DateThu Jan 5 11:46:51 GMT 2012
Rank13Aligned Residues203
% Identity16%Templated1utha_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.........140.........150. ........160.........170.........180.........190.
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Query Sequence  DKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNP. . PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVL
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Template Sequence  ASTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPNAGNLKEDMESGAVDLALGLLPELQTGFFQRRLFRHRYVC
Template Known Secondary structure  T





TT

TTSS
TS



TT

TT
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   192.......200.........210.........220.........230.........240.........250.........260.........270.
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Query Sequence  ICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLF
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Template Sequence  MFRKDHPSAKSPMSLKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHSTDLIATVPQRFAVRC
Template Known Secondary structure  TT
SS

SS

S

TTSGGGGTT


SSSTTTSS
B
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   174.....180.........190.........200.........210.........220.........230.........240.........250...
 
   272.......280.........290.........300.........310.......
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Query Sequence  SRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF
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Template Sequence  EVPFGLTTSPHPA. KLPDIAINLFWHAKYNRDPGNMWLRQLFVELF
Template Known Secondary structure  TTTTT
SS.



GGGTT
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   254.....260...... ...270.........280.........290........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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