Job Description P30979 Confidence 94.34% Date Thu Jan 5 11:46:51 GMT 2012 Rank 146 Aligned Residues 82 % Identity 10% Template d1sfxa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 1.55

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																			.	.																																.								.	.
Query SS confidence																			.	.																																.								.	.
Query Sequence		N	I	D	L	N	L	L	T	I	F	E	A	V	Y	V	H	K	.	.	G	I	V	N	A	A	K	V	L	N	L	T	P	S	A	I	S	Q	S	I	Q	K	L	R	V	I	F	P	D	P	L	.	F	I	R	K	G	Q	G	.	.	V	T	P	T	A	F	A	M	H	L	H	E	Y	I	S	Q	G	L	E	S
Query Conservation																			.	.																																.								.	.
Alig confidence																			.	.																																.								.	.
Template Conservation
Template Sequence		S	F	K	P	S	D	V	R	I	Y	S	L	L	L	E	R	G	G	X	R	V	S	E	I	A	R	E	L	D	L	S	A	R	F	V	R	D	R	L	K	V	L	L	K	R	G	F	V	R	R	E	I	V	E	K	G	W	V	G	Y	I	Y	S	A	E	K	P	E	K	V	L	K	E	F	K	S	S	I	L	G
Template Known Secondary structure																				B										T																T	T	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		103	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	G	A	L	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	E	R	I	E	K
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions