Job Description P30979 Confidence 99.51% Date Thu Jan 5 11:46:51 GMT 2012 Rank 29 Aligned Residues 196 % Identity 12% Template d1ixca2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.20

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		R	T	I	T	I	A	T	T	P	S	V	G	A	L	V	L	P	V	I	Y	R	A	I	K	T	H	Y	P	Q	L	L	L	R	N	P	.	.	P	I	S	D	A	E	N	Q	L	S	Q	F	Q	T	D	L	I	I	D	N	M	F	C	T	N	R	T	V	Q	H	H	V	L	F	T	D	N	M	V	L	I	C	R
Query Conservation																																					.	.
Alig confidence																																					.	.
Template Conservation
Template Sequence		G	E	L	S	V	A	Y	F	G	T	P	I	Y	R	S	L	P	L	L	L	R	A	F	L	T	S	T	P	T	A	T	V	S	L	T	H	X	T	K	D	E	Q	V	E	G	L	L	A	G	T	I	H	V	G	F	S	R	F	F	P	R	H	P	G	I	E	I	V	N	I	A	Q	E	D	L	Y	L	A	V	H
Template Known Secondary structure										S	G	G	G	G	T														T	T																				T	S		S					S						T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		195	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure												.															.	.
Query SS confidence												.															.	.
Query Sequence		E	G	N	P	L	L	S	L	E	D	.	D	R	E	T	I	D	N	A	A	H	V	L	L	L	.	.	P	E	E	Q	N	F	S	G	L	R	Q	R	V	Q	E	M	F	P	D	R	Q	I	N	F	T	S	Y	N	I	L	T	I	A	A	L	V	A	N	S	D	M	L	A	I	I	P	S	R	F	Y	N	L	F
Query Conservation												.															.	.
Alig confidence												.															.	.																																																				.	.
Template Conservation																																																																																.	.
Template Sequence		R	S	Q	S	G	K	F	G	K	T	C	K	L	A	D	L	R	A	V	E	L	T	L	F	P	R	G	G	R	P	S	F	A	D	E	V	I	G	L	F	K	H	A	G	I	E	P	R	I	A	R	V	V	E	D	A	T	A	A	L	A	L	T	X	A	G	A	A	S	S	I	V	P	A	S	V	A	A	.	.
Template Known Secondary structure		G	G	G	G	G	G	T		S				G	G	G	G	T	T									S	S	S	S													T	T										S	S										T	T	S		B									T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	C	W	P	L	E	K	L	P	F	P	S	L	N	E	E	Q	I	D	F	S	I	H	Y	N	K	F	S	L	R	D	P	I	L	H	G	V	I	D	V	I	R	N	A
Query Conservation
Alig confidence																		.													.
Template Conservation																		.													.
Template Sequence		I	R	W	P	D	I	A	F	A	R	I	V	G	T	R	V	.	K	V	P	I	S	C	I	F	R	K	E	K	.	Q	P	P	I	L	A	R	F	V	E	H	V	R	R	S
Template Known Secondary structure		S			T	T									T	T		.										S	S	S	.
Template Predicted Secondary structure																		.													.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions