Job Description P30979 Confidence 99.56% Date Thu Jan 5 11:46:51 GMT 2012 Rank 28 Aligned Residues 201 % Identity 17% Template d1i6aa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		Q	R	T	I	T	I	A	T	T	P	S	V	G	A	L	V	L	P	V	I	Y	R	A	I	K	T	H	Y	P	Q	L	L	L	R	N	P	P	I	S	.	.	D	A	E	N	Q	L	S	Q	F	Q	T	D	L	I	I	D	N	M	F	C	T	N	R	T	V	Q	H	H	V	L	F	T	D	N	M	V	L	I	C
Query Conservation																																									.	.
Alig confidence																																									.	.
Template Conservation
Template Sequence		S	G	P	L	H	I	G	L	I	P	T	V	G	P	Y	L	L	P	H	I	I	P	M	L	H	Q	T	F	P	K	L	E	M	Y	L	H	E	A	Q	T	H	Q	L	L	A	Q	L	D	S	G	K	L	D	A	V	I	L	A	L	V	K	E	S	E	A	F	I	E	V	P	L	F	D	E	P	M	L	L	A	I
Template Known Secondary structure											T	T	T																	T	T																				T	S		S								G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		R	E	G	N	P	L	L	S	L	E	D	.	D	R	E	T	I	D	N	A	A	H	V	L	L	L	P	E	E	Q	N	F	S	G	L	R	Q	R	V	Q	E	M	F	P	D	R	Q	I	N	F	T	S	Y	N	I	L	T	I	A	A	L	V	A	N	S	D	M	L	A	I	I	P	S	R	F	Y	N	L	F	S
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		Y	E	D	H	P	W	A	N	R	E	A	V	P	M	A	D	L	A	G	E	K	L	L	M	L	E	D	G	H	C	L	R	D	Q	A	M	G	F	C	F	E	A	G	A	D	E	D	T	H	F	R	A	T	S	L	E	T	L	R	N	M	V	A	A	G	S	G	I	T	L	L	P	A	L	A	V	P	P	E	R
Template Known Secondary structure			T	T	S	G	G	G	G		S				G	G	G	G	T	T	S						T	T	T	T		S	S		T	T	S	S		S	S		T	T	S					T	T	T	T	S											T	T	S		B					G	G	G	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	W	P	L	E	K	L	P	F	P	S	L	N	E	E	Q	I	D	F	S	I	H	Y	N	K	F	S	L	R	D	P	I	L	H	G	V	I	D	V	I	R	N	A	F
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		K	R	D	G	V	V	Y	L	P	A	I	K	P	E	P	.	R	R	T	I	G	L	V	Y	R	P	G	S	P	L	R	S	R	Y	E	Q	L	A	E	A	I	R	A	R	M
Template Known Secondary structure				T	T								S	S			.										T	T		T	T
Template Predicted Secondary structure																	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions