Job Description P30979 Confidence 96.57% Date Thu Jan 5 11:46:51 GMT 2012 Rank 101 Aligned Residues 91 % Identity 13% Template c3r0aB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196) Resolution 2.31 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.								.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.																																			.	.	.	.	.	.	.												.
Query SS confidence																									.	.	.	.																																			.	.	.	.	.	.	.												.
Query Sequence		I	F	T	T	L	R	N	I	D	L	N	L	L	T	I	F	E	A	V	Y	V	H	K	.	.	.	.	G	I	V	N	A	A	K	V	L	N	L	T	P	S	A	I	S	Q	S	I	Q	K	L	R	V	I	F	P	D	P	L	F	I	R	.	.	.	.	.	.	.	K	G	Q	G	V	T	P	T	A	F	A	.
Query Conservation																									.	.	.	.																																			.	.	.	.	.	.	.												.
Alig confidence																									.	.	.	.																									.	.	.								.	.	.	.	.	.	.												.
Template Conservation																																																					.	.	.
Template Sequence		V	I	K	C	A	L	N	L	T	K	A	D	L	N	V	X	K	S	F	L	N	E	P	D	R	W	I	D	T	D	A	L	S	K	S	L	K	L	D	V	S	T	V	Q	R	S	V	K	K	L	H	.	.	.	E	K	E	I	L	Q	R	S	Q	Q	N	L	D	G	G	G	Y	V	Y	I	Y	K	I	Y	S	K
Template Known Secondary structure								T															S	T	T			B									T	T															.	.	.		T	T	S									T	T	S
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	M	H	L	H	E	Y	I	S	Q	G	L	E	S	I	L	G	A	L	D	I	E	G	S	Y	D	K
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		N	Q	I	R	N	I	I	Q	K	I	V	Q	S	W	A	D	R	L	G	Q	E	L	K	E	W	E	N	G	G	E
Template Known Secondary structure																												T	T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions