Return to main results Retrieve Phyre Job Id

Job DescriptionP30979
Confidence89.76%DateThu Jan 5 11:46:51 GMT 2012
Rank189Aligned Residues51
% Identity6%Templatec3klnC_
PDB info PDB header:transcriptionChain: C: PDB Molecule:transcriptional regulator, luxr family; PDBTitle: vibrio cholerae vpst
Resolution3.08 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70....
Predicted Secondary structure 













Query SS confidence 


















































Query Sequence  TTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDP
Query Conservation       


  
  
  
   

 
 

  
 






  
  

  

  
Alig confidence 


















































Template Conservation       

 

  

  
  
 
   

  
 

  

  

  
  

 
 
Template Sequence  QMYAKLTKREQQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINAK
Template Known Secondary structure  TTGGGS
TT

TTTT

T
S
Template Predicted Secondary structure 













Template SS confidence 


















































   154.....160.........170.........180.........190.........200....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions