Job Description P30979 Confidence 51.24% Date Thu Jan 5 11:46:51 GMT 2012 Rank 306 Aligned Residues 50 % Identity 18% Template c2yqeA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:jumonji/arid domain-containing protein 1d; PDBTitle: solution structure of the arid domain of jarid1d protein Resolution UNK

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.							.
Query SS confidence																																		.	.	.	.	.	.	.	.	.							.
Query Sequence		G	K	P	Q	I	F	T	T	L	R	N	I	D	L	N	L	L	T	I	F	E	A	V	Y	V	H	K	G	I	V	N	A	.	.	.	.	.	.	.	.	.	A	K	V	L	N	L	.	T	P	S	A	I	S	Q	S	I	Q	K	L
Query Conservation																																		.	.	.	.	.	.	.	.	.							.
Alig confidence																																		.	.	.	.	.	.	.	.	.							.
Template Conservation
Template Sequence		G	S	S	L	K	I	P	N	V	E	R	K	I	L	D	L	Y	S	L	S	K	I	V	I	E	E	G	G	Y	E	A	I	C	K	D	R	R	W	A	R	V	A	Q	R	L	H	Y	P	P	G	K	N	I	G	S	L	L	R	S	H
Template Known Secondary structure		S	S						B		S	S	S	B														T								T	T	T								T	T			T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions