Job Description P30979 Confidence 97.80% Date Thu Jan 5 11:46:51 GMT 2012 Rank 46 Aligned Residues 79 % Identity 14% Template c2nyxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404; PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis Resolution 2.30 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																			.	.																																		.	.	.	.	.
Query SS confidence																			.	.																																		.	.	.	.	.
Query Sequence		N	I	D	L	N	L	L	T	I	F	E	A	V	Y	V	H	K	.	.	G	I	V	N	A	A	K	V	L	N	L	T	P	S	A	I	S	Q	S	I	Q	K	L	R	V	I	F	P	D	P	L	F	I	.	.	.	.	.	R	K	G	Q	G	V	T	P	T	A	F	A	M	H	L	H	E	Y	I	S	Q	G	L
Query Conservation																			.	.																																		.	.	.	.	.
Alig confidence																			.	.																											.							.	.	.	.	.
Template Conservation																																															.
Template Sequence		N	I	T	I	P	Q	F	R	T	L	V	I	L	S	N	H	G	P	I	N	L	A	T	L	A	T	L	L	G	V	Q	P	S	A	T	G	R	X	V	D	R	L	V	G	A	.	E	L	I	D	R	L	P	H	P	T	S	R	R	E	L	L	A	A	L	T	K	R	G	R	D	V	V	R	Q	V	T	E	H	R
Template Known Secondary structure		T																	S											T	S															T	.	T	S							S	S	S		S
Template Predicted Secondary structure																																															.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		101	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	I	L	G	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	E	I	A	R	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions