Job Description P30979 Confidence 68.52% Date Thu Jan 5 11:46:51 GMT 2012 Rank 250 Aligned Residues 53 % Identity 15% Template c2lm1A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:lysine-specific demethylase lid; PDBTitle: solution nmr structure of lysine-specific demethylase lid from2 drosophila melanogaster, northeast structural genomics consortium3 target fr824d Resolution UNK

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.								.
Query SS confidence																																					.	.	.	.	.	.	.	.	.								.
Query Sequence		S	S	E	G	K	P	Q	I	F	T	T	L	R	N	I	D	L	N	L	L	T	I	F	E	A	V	Y	V	H	K	G	I	V	N	A	.	.	.	.	.	.	.	.	.	A	K	V	L	N	L	T	.	P	S	A	I	S	Q	S	I	Q	K	L
Query Conservation																																					.	.	.	.	.	.	.	.	.								.
Alig confidence																																					.	.	.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		E	L	Q	G	S	S	L	K	I	P	M	V	E	R	K	A	L	D	L	Y	T	L	H	R	I	V	Q	E	E	G	G	M	E	Q	T	T	K	D	R	K	W	A	K	V	A	N	R	M	Q	Y	P	S	S	K	S	V	G	A	T	L	K	A	H
Template Known Secondary structure		T	T	T					S				T	T	T	S	S														T									T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions