Job Description P30979 Confidence 31.82% Date Thu Jan 5 11:46:51 GMT 2012 Rank 382 Aligned Residues 56 % Identity 20% Template c2gajA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase i; PDBTitle: structure of full length topoisomerase i from thermotoga maritima in2 monoclinic crystal form Resolution 1.95 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.
Query Sequence		T	P	S	A	I	S	Q	S	I	Q	K	L	R	V	I	F	P	D	P	L	F	I	R	K	G	Q	G	V	T	P	T	A	F	A	M	H	L	H	E	Y	I	S	.	.	.	.	.	.	.	.	.	Q	G	L	E	S	I	L	G	A	L	D	I	E	G	S	Y	D
Query Conservation																																												.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.
Template Sequence		R	P	S	T	Y	A	S	T	I	K	L	L	.	.	.	L	N	R	G	Y	I	K	K	I	R	G	Y	L	Y	P	T	I	V	G	S	V	V	M	D	Y	L	E	K	K	Y	S	D	V	V	S	V	S	F	T	A	E	M	E	K	D	L	D	E	V	E	Q	G	K
Template Known Secondary structure			T	T	T									.	.	.			T	T	S					T	T					B														S	T	T	T	T	S																T	T	S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		461	.	.	.	.	.	.	.	.	470	.	.				.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions