Job Description P76056 Confidence 99.49% Date Wed Jan 25 15:21:05 GMT 2012 Rank 10 Aligned Residues 171 % Identity 22% Template d1a0pa2 SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core Resolution 2.50

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		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.							.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		D	P	L	S	K	T	E	F	N	A	L	M	E	S	E	K	G	.	.	.	.	.	.	Q	S	Q	N	L	W	K	F	A	V	Y	S	G	L	R	H	G	E	L	A	A	L	A	W	E	D	V	D	L	E	K	G	I	V	N	V	R	R	N	L	T	I	L	D	M	F	G	P	P	K	T	N	A	G	I	R	T
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	L	S	E	A	Q	V	E	R	L	L	Q	A	P	L	I	D	Q	P	L	E	L	R	D	K	A	M	L	E	V	L	Y	A	T	G	L	R	V	S	E	L	V	G	L	T	M	S	D	I	S	L	R	Q	G	V	V	R	V	I	.	.	.	.	.	.	.	.	.	.	.	.	G	K	G	N	K	E	R	L
Template Known Secondary structure																S		T	T	S																								T	T		B	G	G	G			T	T	T	T						.	.	.	.	.	.	.	.	.	.	.	.		S	S	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170													.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		V	T	L	L	Q	P	A	L	E	A	L	K	E	Q	Y	K	L	T	G	H	H	R	K	S	E	I	T	F	Y	H	R	E	Y	G	R	T	E	K	Q	K	L	H	F	V	F	M	P	R	V	C	N	G	K	Q	K	P	Y	Y	S	V	S	S	L	G	A	R	W	N	A	A	V	K	R	A	G	I	R	.	.	R
Query Conservation																																																																															.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	L	G	E	E	A	V	Y	W	L	E	T	Y	L	E	H	G	R	P	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	N	G	V	S	I	D	V	L	F	P	S	Q	R	A	Q	Q	M	T	R	Q	T	F	W	H	R	I	K	H	Y	A	V	L	A	G	I	D	S	E	K
Template Known Secondary structure																			T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T					B	S	S	B		T	T	S	S	B																	T	T			G	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.																			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	P	Y	H	T	R	H	T	F	A	C	W	L	L	T	A	G	A	N	P	A	F	I	A	S	Q	M	G	H	E	T	A	Q	M	V	Y	E	I	Y	G	M	W	I	D	D	M	N	D	E	Q	I
Query Conservation
Alig confidence																																		.	.			.
Template Conservation																																		.	.			.
Template Sequence		L	S	P	H	V	L	R	H	A	F	A	T	H	L	L	N	H	G	A	D	L	R	V	V	Q	M	L	L	S	D	L	S	.	.	T	T	.	Q	I	Y	T	H	V	A	T	E	R	L	R	Q	L	H
Template Known Secondary structure																				S	S		G	G	G	S	S							.	.			.
Template Predicted Secondary structure																																		.	.			.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions