Job Description P76056 Confidence 99.04% Date Wed Jan 25 15:21:05 GMT 2012 Rank 26 Aligned Residues 102 % Identity 14% Template c3nrwA_ PDB info PDB header:recombination Chain: A: PDB Molecule:phage integrase/site-specific recombinase; PDBTitle: crystal structure of the n-terminal domain of phage integrase/site-2 specific recombinase (tnp) from haloarcula marismortui, northeast3 structural genomics consortium target hmr208a Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		R	V	I	K	T	F	G	E	L	C	D	I	W	T	K	I	K	E	T	E	L	T	T	N	T	M	K	K	T	K	S	Q	L	K	T	L	R	I	I	I	C	.	.	E	S	T	P	I	S	H	I	R	Y	S	D	I	L	N	Y	R	N	E	L	L	H	G	E	T	L	Y	L	D	N	P	R	S	N	K	K	G
Query Conservation																																											.	.
Alig confidence																																											.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	S	L	S	P	R	E	A	R	D	R	Y	L	A	H	R	Q	T	D	A	A	D	A	S	I	K	S	F	R	Y	R	L	K	H	F	V	E	W	A	E	E	R	D	I	T	A	X	R	E	L	T	G	W	K	L	D	E	Y	E	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	G	S	D
Template Known Secondary structure																			T	T	T	S																						T	T			S	G	G	G													.	.	.	.	.	.	.	.	.	.	.	.	.			T	S	S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.														.	.	.	.	70
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	V	R	T	V	D	N	Y	I	A	L	L	C	S	L	L	R	F	A	Y	Q	S	G	F	I	S	T	K	P	F	E	G	V	K	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	P	A	T	L	N	G	E	X	Q	T	L	K	N	W	L	E	Y	L	A	R	I	D	V	V	D	E	D	L	P	E	K	V	H	V	P
Template Known Secondary structure																								T	T	S	S		T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions