Job Description P76056 Confidence 97.62% Date Wed Jan 25 15:21:05 GMT 2012 Rank 29 Aligned Residues 48 % Identity 23% Template c3jtzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: structure of the arm-type binding domain of hpi integrase Resolution 1.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	T	G	V	E	I	R	G	R	Y	I	R	I	W	F	M	F	R	G	K	R	C	R	E	T	L	K	G	W	E	I	T	N	S	N	I	K	K	A	G	N	L	R	A	L	I	V	H	E	I	N	S	G
Query Conservation
Alig confidence								.	.	.	.																							.	.
Template Conservation								.	.	.	.																							.	.
Template Sequence		K	P	G	G	S	R	.	.	.	.	H	W	Y	L	K	Y	R	I	S	G	K	E	S	R	I	A	L	G	A	Y	P	A	.	.	I	S	L	S	D	A	R	Q	Q	R	E	G	I	R	K	M	L	A	L	N
Template Known Secondary structure			T	T	S			.	.	.	.									T	T										T	T	T	.	.	S																	T
Template Predicted Secondary structure								.	.	.	.																							.	.
Template SS confidence
		31	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions