Job Description P76056 Confidence 40.75% Date Wed Jan 25 15:21:05 GMT 2012 Rank 34 Aligned Residues 51 % Identity 18% Template c3igmA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:pf14_0633 protein; PDBTitle: a 2.2a crystal structure of the ap2 domain of pf14_0633 from p.2 falciparum, bound as a domain-swapped dimer to its cognate dna Resolution 2.20 Å

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		1	.	.	.	.	.	.	.			.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure										.	.																													.	.	.
Query SS confidence										.	.																													.	.	.
Query Sequence		M	S	K	L	P	T	G	V	.	.	E	I	R	G	R	Y	I	R	I	W	F	M	F	R	G	K	R	C	R	E	T	L	K	G	W	E	I	T	.	.	.	N	S	N	I	K	K	A	G	N	L	R	A	L	I	V
Query Conservation										.	.																													.	.	.
Alig confidence										.	.																													.	.	.
Template Conservation
Template Sequence		M	S	S	G	Y	P	G	V	S	W	N	K	R	M	C	A	W	L	A	F	F	Y	D	G	A	S	R	R	S	R	T	F	H	P	K	H	F	N	M	D	K	E	K	A	R	L	A	A	V	E	F	M	K	T	V	E
Template Known Secondary structure				S	S	S	T	T					T	T	T	T									T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions