Job Description P76056 Confidence 99.38% Date Wed Jan 25 15:21:05 GMT 2012 Rank 16 Aligned Residues 114 % Identity 13% Template c2kkvA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: solution nmr structure of an integrase domain from protein2 spa4288 from salmonella enterica, northeast structural3 genomics consortium target slr105h Resolution UNK

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	R	V	I	K	T	F	G	E	L	C	D	I	W	T	K	I	K	E	T	E	L	T	T	N	T	M	K	K	T	K	S	Q	L	K	T	L	R	I	I	I	C	E	S	T	P	I	S	H	I	R	Y	S	D	I	L	N	Y	R	N	E	L	L	H	G	E	T	L	Y	L	D	N	P	R	S	N	K	K	G
Query Conservation
Alig confidence																						.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	N	S	G	A	Y	T	F	E	T	I	A	R	E	W	H	E	S	N	K	.	R	W	S	E	D	H	R	S	R	V	L	R	Y	L	E	L	Y	I	F	P	H	I	G	S	S	D	I	R	Q	L	K	T	S	H	L	L	A	P	I	K	E	V	D	T	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S					S										T	T			.	S	S																	S	S	S	S	T	T	S		T	T				S	G	G	G										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	V	R	T	V	D	N	Y	I	A	L	L	C	S	L	L	R	F	A	Y	Q	S	G	F	I	S	T	K	P	F	E	G	V	K	K	L	Q	R	N	R	I	K	P	D	P	L	S	K
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	K	H	D	V	A	Q	R	L	Q	Q	R	V	T	A	I	M	R	Y	A	V	Q	N	D	Y	I	D	S	N	P	A	S	D	M	A	G	A	L	S	T	T	K	A	R	H	Y	P	L	E
Template Known Secondary structure		.	T																					T	T	S	S		S		S		S	S	S	S				S						S	S			T
Template Predicted Secondary structure		.
Template SS confidence
			68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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