Job Description P76056 Confidence 99.34% Date Wed Jan 25 15:21:05 GMT 2012 Rank 19 Aligned Residues 104 % Identity 13% Template c2khqA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: solution nmr structure of a phage integrase ssp19472 fragment 59-159 from staphylococcus saprophyticus,3 northeast structural genomics consortium target syr103b Resolution UNK

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		81	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		K	T	F	G	E	L	C	D	I	W	T	K	I	.	K	E	T	E	L	T	T	N	T	M	K	K	T	K	S	Q	L	K	T	L	R	I	I	I	C	E	S	T	P	I	S	H	I	R	Y	S	D	I	L	N	Y	R	N	E	L	L	H	G	E	T	L	Y	L	D	N	P	R	S	N	K	K	G	R	T	V	R
Query Conservation															.
Alig confidence															.																			.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	F	A	D	Y	F	Y	Q	W	Y	E	V	N	K	L	P	H	V	S	E	S	T	K	R	H	Y	E	S	A	Y	K	.	H	I	K	D	H	F	R	H	K	L	L	K	D	I	K	R	T	E	Y	Q	K	F	L	N	E	Y	G	L	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	E
Template Known Secondary structure			B													T	G	G	G	S														.							S	S		B	G	G	G																	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.															.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	D	N	Y	I	A	L	L	C	S	L	L	R	F	A	Y	Q	S	G	F	I	S	T	K	P	F	E	G	V	K	K	L	Q	R	N	R	I	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	R	K	L	N	S	Y	I	R	N	A	F	D	D	A	I	H	E	G	Y	V	I	K	N	P	T	Y	K	A	E	L	H	A	S	V	L	E	H	H
Template Known Secondary structure																				T	T						G	G	G	G						G	G	G
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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