 |
Job Description | P76056 | Confidence | 11.75% | Date | Wed Jan 25 15:21:05 GMT 2012 |
Rank | 64 | Aligned Residues | 33 |
% Identity | 18% | Template | c2jpcA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:ssrb; |
PDBTitle: ssrb dna binding protein
|
Resolution | UNK |
|
  |   |
357 | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | H | T | F | A | C | W | L | L | T | A | G | A | N | P | A | F | I | A | S | Q | M | G | H | E | T | A | Q | M | V | Y | E | I |
Query Conservation |   |
|
|
|
|   |
|
|   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |   |   |
|   |
|   |
|   |   |
|
|
|   |   |
|   | . |
|
|   |   |
|
|   |   |   |
Template Sequence |   |
L | R | E | R | Q | V | L | K | L | I | D | E | G | Y | T | N | H | G | I | S | E | K | L | H | . |
I | S | I | K | T | V | E | T | H |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  | T | S |
|
| S |  |  |  |  |  |  | T |
| . | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|