Job Description P76056 Confidence 61.64% Date Wed Jan 25 15:21:05 GMT 2012 Rank 33 Aligned Residues 57 % Identity 12% Template c2h7fX_ PDB info PDB header:isomerase/dna Chain: X: PDB Molecule:dna topoisomerase 1; PDBTitle: structure of variola topoisomerase covalently bound to dna Resolution 2.70 Å

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		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370																				.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Y	Y	S	V	S	S	L	G	A	R	W	N	A	A	V	K	R	A	G	I	R	R	R	N	P	Y	H	T	R	H	T	F	A	C	W	L	L	T	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	A	F	I	A	S	Q	M	G	H	E	T	A	Q	M	V	Y	E
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																	.	.	.	.	.	.	.																																																			.
Template Sequence		N	K	L	S	E	R	K	V	Y	E	S	I	K	Q	F	.	.	.	.	.	.	.	G	I	R	I	K	D	L	R	T	Y	G	V	N	Y	T	F	L	Y	N	F	W	T	N	V	K	S	I	S	P	L	P	S	P	K	K	L	I	A	L	T	I	K	Q	T	A	E	V	V	G	H	.	T	P	S	I	S	K	R
Template Known Secondary structure		T	T											G	G	G	.	.	.	.	.	.	.	T																										S	S	S																				T	S	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.																																																			.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.
		390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	A	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions