Job Description P76056 Confidence 99.94% Date Wed Jan 25 15:21:05 GMT 2012 Rank 4 Aligned Residues 298 % Identity 12% Template c1crxA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:cre recombinase; PDBTitle: cre recombinase/dna complex reaction intermediate i Resolution 2.40 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																.	.																							.
Query SS confidence																.	.																							.
Query Sequence		G	E	L	C	D	I	W	T	K	I	K	E	T	E	.	.	L	T	T	N	T	M	K	K	T	K	S	Q	L	K	T	L	R	I	I	I	C	E	.	S	T	P	I	S	H	I	R	Y	S	D	I	L	N	Y	R	N	E	L	L	H	G	E	T	L	Y	L	D	N	P	R	S	N	K	K	G	R	T	V	R	T
Query Conservation																.	.																							.
Alig confidence																.	.																							.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	V	R	K	N	L	M	D	M	F	R	D	R	Q	A	F	S	E	H	T	W	K	M	L	L	S	V	C	R	S	W	A	A	W	C	K	L	N	N	R	K	W	F	P	A	E	P	E	D	V	R	D	Y	L	L	Y	L	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	L	A	V	K	T
Template Known Secondary structure														T	G	G	G	S																							T				S	S																.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80														.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.											.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	N	Y	I	A	L	L	C	S	L	L	R	F	A	Y	Q	S	G	F	I	S	T	K	P	F	E	G	.	.	.	.	.	.	.	.	.	.	V	K	K	L	Q	R	N	R	I	K	P	D	P	L	S	K	T	E	F	N	A	L	M	E	S	E	K	G	Q	S	Q	N	L	W	K	F	A	V	Y	S	G	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	Q	H	L	G	Q	L	N	M	L	H	R	R	S	G	L	P	R	P	S	D	S	N	A	V	S	L	V	M	R	R	I	R	K	E	N	V	D	A	G	E	R	A	K	Q	A	L	A	F	E	R	T	D	F	D	Q	V	R	S	L	M	E	N	S	D	R	C	Q	D	I	R	N	L	A	F	L	G	I	A
Template Known Secondary structure																T	T	S			G	G	G	S																		T																							T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	G	E	L	A	A	L	A	W	E	D	V	D	L	E	K	G	I	V	N	V	R	R	N	L	T	I	L	D	M	F	G	P	P	K	T	N	A	G	I	R	T	V	T	L	L	Q	P	A	L	E	A	L	K	E	Q	Y	K	L	T	G	H	H	R	K	S	E	I	T	F	Y	H	R	E	Y	G	R	T	E
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	N	T	L	L	R	I	A	E	I	A	R	I	R	V	K	D	I	S	R	T	D	G	G	R	M	L	I	H	I	G	R	T	K	T	L	V	S	T	A	G	V	E	K	A	L	S	L	G	V	T	K	L	V	E	R	W	I	S	V	S	G	V	A	.	.	.	.	.	.	.	.	.	.	.	.	D	D	P	N
Template Known Secondary structure															B	G	G	G					G	G	G											S	S	S	S		S																				T	T		G	G	.	.	.	.	.	.	.	.	.	.	.	.	G	S	T	T
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.													.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.										.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	K	L	H	F	V	F	M	P	R	V	C	N	G	K	Q	K	P	Y	Y	S	V	S	S	L	G	A	R	W	N	A	A	V	K	R	A	.	.	.	.	.	.	.	.	.	G	I	R	R	R	N	P	Y	H	T	R	H	T	F	A	C	W	L	L	T	A	G	A	N	P	A	F	I	A	S	Q	M	G	H
Query Conservation																																							.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	L	F	C	R	V	R	K	N	G	V	A	A	P	S	A	T	S	Q	L	S	T	R	A	L	E	G	I	F	E	A	T	H	R	L	I	Y	G	A	K	D	D	S	G	Q	R	Y	L	A	W	S	G	H	S	A	R	V	G	A	A	R	D	M	A	R	A	G	V	S	I	P	E	I	M	Q	A	G	G	W
Template Known Secondary structure		S	B	S	S					T	T	S						S	S																						S				S	S		S		S	S			T	T													T	T											T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	A	Q	M	V	Y	E	I	Y	G	M	W	I	D	D	M	N	D	E	Q	I	A	M	L	N
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		T	N	V	N	I	V	.	M	N	Y	I	R	N	L	D	S	E	T	G	A	M	V	R	L	L	E
Template Known Secondary structure		S	S	S	T	T		.				S	T	T		G	G	G	S								T
Template Predicted Secondary structure								.
Template SS confidence
		316	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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