 |
Job Description | P0A8I3 | Confidence | 3.64% | Date | Thu Jan 5 11:07:54 GMT 2012 |
Rank | 89 | Aligned Residues | 48 |
% Identity | 21% | Template | c3l12A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:putative glycerophosphoryl diester phosphodiesterase; |
PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (yp_165505.1) from silicibacter pomeroyi dss-3 at3 1.60 a resolution
|
Resolution | 1.60 Å |
|
  |   |
198 | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | K | F | K | I | I | S | F | Y | A | K | K | A | R | G | L | M | S | R | F | I | I | E | N | R | L | T | K | P | E | Q | L | T | G | F | N | S | E | G | Y | F | F | D | E | D | S | S | S | N | G | E | L | V |
Query Conservation |   |
  |
|
|   |
|   |
|
|   |   |
|
|   |
|
|
|   |
|   |
|   |
|   |   |
|   |
|   |   |   |
|   |
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|
| . | . | . | . | . |
|
| . |   |   |   |   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|
|
|   |
|
|
Template Sequence |   |
P | S | V | V | R | V | I | G | H | . |
. |
. |
. |
. |
R | G | . |
A | R | G | V | X | P | E | N | T | L | E | G | F | A | F | T | L | A | A | G | V | R | A | L | E | F | D | V | V | X | T | A | D | G | V | P | V |
Template Known Secondary structure |   |
T | T | B |
|  |  |  |  |  | . | . | . | . | . | T | T | . | T | T | T | T | S |
| T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  | . | . | . | . | . |
|
| . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | |
|
|
|
|
. | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|