Job Description P0A8I3 Confidence 28.90% Date Thu Jan 5 11:07:54 GMT 2012 Rank 6 Aligned Residues 42 % Identity 17% Template c2p1nD_ PDB info PDB header:signaling protein Chain: D: PDB Molecule:skp1-like protein 1a; PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase Resolution 2.50 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	L	L	D	N	S	Q	Q	L	I	H	E	A	R	K	L	T	P	P	Q	I	S	T	L	M	R	I	S	D	K	L	A	G	I	N	A	A	R	F	H	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	L	D	L	T	C	Q	T	V	A	D	M	I	K	G	K	T	P	E	E	I	R	T	T	F	N	I	K	N	D	F	T	P	E	E	E	E	E	V	R	R
Template Known Secondary structure																T	T										S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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