Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8I3
Confidence5.75%DateThu Jan 5 11:07:54 GMT 2012
Rank51Aligned Residues107
% Identity11%Templatec1giqA_
PDB info PDB header:toxinChain: A: PDB Molecule:iota toxin component ia; PDBTitle: crystal structure of the enzymatic componet of iota-toxin2 from clostridium perfringens with nadh
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80.........90.........100 .........110.........120.........130......
Predicted Secondary structure 










....
























Query SS confidence 







































. . . .



































Query Sequence  AARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDD. . . . FDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLE
Query Conservation                   


  
 

 
  
    
    ....      

 






 


 
 
 





  

 
Alig confidence 










.



























....



































Template Conservation     
  
  

.
  
  

  

   
  

  

           

  
  




 
 

   
 



       
Template Sequence  KENYSDWSNKL. TPNELADVNDYMRGGYTAINNYLISNGPLNNPNPELDSKVNNIENALKLTPIPSNLIVYRRSGPQEFG
Template Known Secondary structure  TTTGGGS.
TTTTTGGGTS

TTS

SS

GGGGT
Template Predicted Secondary structure 
.





















Template SS confidence 















































































   225....230..... ....240.........250.........260.........270.........280.........290.........300...
 
   137..140.........150.........160.........170.
Predicted Secondary structure 











Query SS confidence 


































Query Sequence  NARGKDLYQFWGDIITNKLNEALAAQGDNVVINLA
Query Conservation        

 

   
   
           




Alig confidence 























...







Template Conservation                    
     ...
    
 
Template Sequence  LTLTSPEYDFNKIENIDAFKEKWE. . . GKVITYPN
Template Known Secondary structure 

TT
GGG
TTST...T

S
Template Predicted Secondary structure 













...



Template SS confidence 


































   304.....310.........320....... ..330.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions