Job Description P0ACH8 Confidence 85.87% Date Thu Jan 5 11:18:13 GMT 2012 Rank 257 Aligned Residues 139 % Identity 9% Template c3kvaA_ PDB info PDB header:h3k4me3 binding protein, transferase Chain: A: PDB Molecule:jmjc domain-containing histone demethylation protein 1d; PDBTitle: structure of kiaa1718 jumonji domain in complex with alpha-2 ketoglutarate Resolution 2.79 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	N	I	N	Q	G	H	I	T	L	F	W	A	C	T	P	H	Q	L	T	D	T	G	T	C	Q	S	M	A	I	F	N	L	P	M	H	L	F	L	S	W	P	L	D	K	D	L	I	N	H	V	T	H	G	M	V	I	K	S	L	A	T	Q	Q	L	S	P	F	E	V	R	R	W	Q	Q	E	L	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	C	V	V	K	Q	G	H	T	L	F	V	P	T	G	W	I	H	A	V	L	T	S	Q	D	C	M	A	F	G	G	N	F	L	H	N	L	N	I	G	M	Q	L	R	C	Y	E	M	E	K	R	L	K	T	P	D	L	F	K	F	P	F	F	E	A	I	C	W	F	V	A	K	N	L	L	E	T	L	K	E
Template Known Secondary structure							T	T							T	T																					S	S															T	T		G	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	E	Q	I	R	Q	L	A	I	D	E	I	G	L	M	L	K	R	F	S	L	S	G	W	E	P	I	L	V	N	K	T	S	R	T	H	K	N	S	V	S	R	H	A	Q	F	Y	V	S	Q	M	L	G	F	I	A	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	E	D	G	F	Q	P	Q	T	Y	L	V	Q	G	V	K	A	L	H	T	A	L	K	L	W	M	K	K	E	L	V	S	E	H	A	F	E	I	P	D	N	V	R	P	G	H	L	I	K	E	L	S	K	V	I	R	A	I
Template Known Secondary structure				T	T	T																						T		T	T	T					G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions