Job Description P0ACH8 Confidence 79.01% Date Thu Jan 5 11:18:13 GMT 2012 Rank 337 Aligned Residues 154 % Identity 6% Template c3e6dA_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:cyclic nucleotide-binding protein; PDBTitle: crystal structure of cprk c200s Resolution 2.00 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		L	I	N	N	E	K	V	N	I	N	Q	G	H	.	.	.	.	I	T	L	F	W	A	C	T	P	H	Q	L	T	D	T	G	T	C	Q	S	M	A	I	F	N	L	P	M	H	L	F	L	S	W	P	L	D	K	D	L	I	N	H	V	T	H	G	M	V	I	K	S	L	A	T	Q	Q	L	S	P	F	E	V
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		D	F	A	K	G	S	A	V	I	M	P	G	E	E	I	T	S	M	I	F	L	V	E	G	K	I	K	L	D	I	I	F	E	D	G	S	E	K	L	L	Y	Y	A	G	G	N	S	L	I	G	K	L	Y	P	T	G	N	N	I	Y	A	T	A	M	E	P	T	R	T	C	W	F	S	E	K	S	L	R	T	V
Template Known Secondary structure					T	T						T	T												S									T	T	S										T	T						S	S			S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	W	Q	Q	E	L	N	S	P	N	E	Q	I	R	Q	L	A	I	D	E	I	G	L	M	L	K	R	F	S	L	S	G	W	E	P	I	L	V	N	K	T	S	R	T	H	K	N	S	V	S	R	H	A	Q	F	Y	V	S	Q	M	L	G	F	I	A	E	N	Y	D	Q	A	L	T	I	N	D	V	A	E
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	T	D	E	D	M	I	F	E	I	F	K	N	Y	L	T	K	V	A	Y	Y	A	R	Q	V	P	T	I	R	I	L	R	L	F	Y	E	L	C	S	S	Q	G	K	R	V	G	D	T	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	M	P	L	S	Q	K	S	I	G	E
Template Known Secondary structure						T																																										T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																		.	.	.	170	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	K	L	N	A	N	Y	A	M	G	I	F	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	G	V	H	H	V	T	V	S	R	V	L	A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions