Job Description P0ACH8 Confidence 92.29% Date Thu Jan 5 11:18:13 GMT 2012 Rank 125 Aligned Residues 83 % Identity 8% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.									.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.
Query Sequence		L	G	F	I	A	E	N	Y	D	Q	A	L	T	I	N	D	V	A	E	H	V	K	L	N	A	N	Y	A	M	G	I	F	Q	R	V	M	.	.	.	.	.	.	.	.	Q	L	T	M	K	Q	Y	I	T	A	M	R	I	N	H	V	R	A	L	L	S	D	T	D	K	S	I	L	D	I	A	L	T	A	G	F
Query Conservation																																						.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.					.	.
Template Conservation																																																		.	.
Template Sequence		R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	.	.	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N	S	C	K	T	A	R	D	I	R	N	E	L	Q	L
Template Known Secondary structure											T	T											T												S	G	G	G	T	T										.	.	S	S																										T	T
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		269		270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		R	.	S	S	S	R	F	Y	S	T	F	G	K	Y
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		S	A	S	K	R	T	I	L	N	V	I	K	R	S
Template Known Secondary structure			S												T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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