Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACP7
Confidence100.00%DateThu Jan 5 11:18:40 GMT 2012
Rank21Aligned Residues276
% Identity17%Templatec3hcwB_
PDB info PDB header:rna binding proteinChain: B: PDB Molecule:maltose operon transcriptional repressor; PDBTitle: crystal structure of probable maltose operon transcriptional repressor2 malr from staphylococcus areus
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VNHTKSIGLLATS. . . . . SEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPL
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Template Sequence  TNQTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSKENDPI
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Query Sequence  LAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIK
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Template Sequence  KQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIEQGVDELIFITEKGNFEVSKDRIQGFETVASQFNLD
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Query Sequence  VPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTI
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Template Sequence  YQIIETSNEREVILNYMQNLHTRLKDPNIKQAIISLDAMLHLAILSVLYELNIEIPKDVMTATFNDSYLTEIASPPQTCI
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   216...220.........230.........240.........250.........260.........270.........280.........290.....
 
   291........300.........310.........320.........330...
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Query Sequence  HQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVAD
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Template Sequence  DIKPRMLGQQAGSAILNILKNDV. . IELVIIDTELKIRKSTQR
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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