Job Description P0ACP7 Confidence 99.97% Date Thu Jan 5 11:18:40 GMT 2012 Rank 26 Aligned Residues 266 % Identity 14% Template c3gv0A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, laci family; PDBTitle: crystal structure of laci family transcription regulator from2 agrobacterium tumefaciens Resolution 2.35 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		H	T	K	S	I	G	L	L	A	T	S	S	E	A	.	.	A	Y	F	A	E	I	I	E	A	V	E	K	N	C	F	Q	K	G	Y	T	L	I	L	G	N	A	W	N	N	L	E	K	Q	R	A	Y	L	S	M	M	A	Q	K	R	V	D	G	L	L	V	M	C	S	E	Y	P	E	P	L	L	A	M	L	E
Query Conservation																.	.
Alig confidence																.	.																																																									.
Template Conservation																																																																										.
Template Sequence		K	T	N	V	I	A	L	V	L	S	V	D	E	E	L	X	G	F	T	S	Q	X	V	F	G	I	T	E	V	L	S	T	T	Q	Y	H	L	V	V	T	P	H	I	H	A	K	D	S	X	V	P	I	R	Y	I	L	E	T	G	S	A	D	G	V	I	I	S	K	I	E	P	N	.	D	P	R	V	R	F	X
Template Known Secondary structure											B					S	S															T	T	S	S								B	S	S	G	G	G	T	T										T			S						S			T	T	.
Template Predicted Secondary structure																																																																										.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	R	H	I	P	M	V	V	M	D	W	G	E	A	K	A	D	F	T	D	A	V	I	D	N	A	F	E	G	G	Y	M	A	G	R	Y	L	I	E	R	G	H	R	E	I	G	V	I	P	G	P	L	E	R	N	T	G	A	G	R	L	A	G	F	M	K	A	M	E	E	A	M	I	K	V	P	E	S	W
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		T	E	R	N	X	P	F	V	T	H	G	R	S	D	X	G	I	E	H	A	F	H	D	F	D	N	E	A	Y	A	Y	E	A	V	E	R	L	A	Q	C	G	R	K	R	I	A	V	I	.	V	P	P	S	R	F	S	F	H	D	H	A	R	K	G	F	N	R	G	I	R	D	F	G	L	T	E	F	P	I	D
Template Known Secondary structure				T	T							S				S	S																								T	T								.				T	T	S																	T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	Q	G	D	F	E	P	E	S	G	Y	R	A	M	Q	Q	I	L	S	Q	P	H	R	P	T	A	V	F	C	G	G	D	I	M	A	M	G	A	L	C	A	A	D	E	M	G	L	R	V	P	Q	D	V	S	L	I	G	Y	D	N	V	R	N	A	R	Y	F	T	P	A	L	T	T	I	H	Q	P	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	T	I	E	T	P	L	E	K	I	R	D	F	G	Q	R	L	X	Q	S	S	D	R	P	D	G	I	V	S	I	S	G	S	S	T	I	A	L	V	A	G	F	E	A	A	G	V	K	I	G	E	D	V	D	I	V	S	K	Q	S	A	E	F	L	N	W	I	K	P	Q	I	H	T	V	N	E	D	I	K
Template Known Secondary structure		S			T	T	S													T	T	S	S	S			S					S														T	T	T			T	T	T	S								S	S	T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	G	E	T	A	F	N	M	L	L	D	R	I	V	N	K	R	E	E	P	Q	S	I	E	V	H	P	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	G	R	E	L	A	K	A	L	L	A	R	I	N	G	E	A	A	E	T	L	Q	S	I	S	G	P	V	W
Template Known Secondary structure																T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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