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Job DescriptionP0ACP7
Confidence99.97%DateThu Jan 5 11:18:40 GMT 2012
Rank32Aligned Residues266
% Identity21%Templatec3cs3A_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:sugar-binding transcriptional regulator, laci family; PDBTitle: crystal structure of sugar-binding transcriptional regulator (laci2 family) from enterococcus faecalis
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70.........80.........90.........100.........110.........120.........130....
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Query Sequence  KVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAML
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Template Sequence  KRRQTNIIGVYLADYGGSFYGELLEGIKKGLALFDYEMIVCSGKKS. . . . . . . HLFIPEKMVDGAIILDWTFP. TKEIEK
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   55....60.........70.........80.........90.........100 .........110.........120 ......
 
   135....140.........150.........160.........170.........180.........190.........200.........210....
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Query Sequence  EEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPES
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Template Sequence  FAERGHSIVVLDRTTEHRNIRQVLLDNRGGATQAIEQFVNVGSKKVLLLS. GPEKGYDSQERLAVSTRELTRFG. . IPYE
Template Known Secondary structure  TT
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   127..130.........140.........150.........160.........170...... ...180.........190......... 200...
 
   215....220.........230.........240.........250.........260.........270.........280.........290....
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Query Sequence  WIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPK
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Template Sequence  IIQGDFTEPSGYAAAKKILSQPQTEPVDVFAFNDEMAIGVYKYVAETNYQMGKDIRIIGFDNSELGAFVQPRLATIAYSK
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   204.....210.........220.........230.........240.........250.........260.........270.........280...
 
   295....300.........310.........320.........330...
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Query Sequence  DSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVAD
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Template Sequence  HRWGMVAAEKIIHLMRGEAAESEH. . IYTRFIEGESFPS
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   284.....290.........300....... ..310.........320
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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