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Job DescriptionP0ACP7
Confidence100.00%DateThu Jan 5 11:18:40 GMT 2012
Rank13Aligned Residues266
% Identity23%Templatec3c3kA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:alanine racemase; PDBTitle: crystal structure of an uncharacterized protein from actinobacillus2 succinogenes
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90.........100.........110.........120.........130.......
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Query Sequence  HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEY
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Template Sequence  KTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGYRILLCNTESDLARSRSCLTLLSGKMVDGVITMDAL. . SELPELQNII
Template Known Secondary structure 


S
TTSTT

TT
TTT

S


G..GG
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   7..10.........20.........30.........40.........50.........60.........70.... .....80....
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  RHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIV
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Template Sequence  GAFPWVQCAEYDPLSTVSSVSIDDVAASEYVVDQLVKSGKKRIA. LINHDLAYQYAQHRESGYLNRLKFHGLDYSR. ISY
Template Known Secondary structure  TTSSSS

TTSSS


TT


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TTST



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   85....90.........100.........110.........120........ .130.........140.........150......... 160..
 
   218.220.........230.........240.........250.........260.........270.........280.........290.......
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Query Sequence  QGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSL
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Template Sequence  AENLDYMAGKLATFSLLKSAVKPDAIFAISDVLAAGAIQALTESGLSIPQDVAVVGFDGVDISQITVPALTTVQQPSEQI
Template Known Secondary structure 
SSSSSSSS

SSSTT

TTTT

SB

GGGGTSSS

B

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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   298.300.........310.........320.........330.
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Query Sequence  GETAFNMLLDRIVNKREEPQSIEVHPRLIERRSV
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Template Sequence  GMKAVSLLLEQIHSDV. . . . HHLLPWKFVRRQSS
Template Known Secondary structure  T


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TTT
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   243......250........ .260.........270..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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