Job Description P0ACP7 Confidence 99.98% Date Thu Jan 5 11:18:40 GMT 2012 Rank 23 Aligned Residues 271 % Identity 24% Template c2rgyA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, laci family; PDBTitle: crystal structure of transcriptional regulator of laci family from2 burkhoderia phymatum Resolution 2.05 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		K	S	I	G	L	L	A	T	S	S	E	A	A	Y	F	A	E	I	I	E	A	V	E	K	N	C	F	Q	K	G	Y	T	L	I	L	G	N	A	W	N	N	L	E	.	.	.	K	Q	R	A	Y	L	S	M	M	A	Q	K	R	V	D	G	L	L	V	M	C	S	E	Y	P	E	P	L	L	A	M	L	E	E
Query Conservation																																													.	.	.
Alig confidence																																													.	.	.																										.
Template Conservation																																																																									.
Template Sequence		G	I	I	G	L	F	V	P	T	F	F	G	S	Y	Y	G	T	I	L	K	Q	T	D	L	E	L	R	A	V	H	R	H	V	V	V	A	T	G	C	G	E	S	T	P	R	E	Q	A	L	E	A	V	R	F	L	I	G	R	D	C	D	G	V	V	V	I	S	H	D	L	H	.	D	E	D	L	D	E	L	H
Template Known Secondary structure									S		S		S																	T	T										S	S	S																T	T		S							S	S	S		.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	H	I	P	M	V	V	M	D	W	G	E	A	K	A	D	F	T	D	A	V	I	D	N	A	F	E	G	G	Y	M	A	G	R	Y	L	I	E	R	G	H	R	E	I	G	V	I	P	G	P	L	E	R	N	T	G	A	G	R	L	A	G	F	M	K	A	M	E	E	A	M	I	K	V	P	E	S	W	I
Query Conservation
Alig confidence																																													.
Template Conservation																																													.
Template Sequence		R	X	H	P	K	X	V	F	L	N	R	A	F	D	A	L	P	D	A	S	F	C	P	D	H	R	R	G	G	E	L	A	A	A	T	L	I	E	H	G	H	R	K	.	L	A	V	I	S	G	P	F	T	A	S	D	N	V	E	R	L	D	G	F	F	D	E	L	A	R	H	G	I	A	R	D	S	V	P	L
Template Known Secondary structure					S	S					S	S			T	T	S	G	G	G																				T	T			S	.						S		T	T																	T	T	T			G	G	G	S
Template Predicted Secondary structure																																													.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	G	D	F	E	P	E	S	G	Y	R	A	M	Q	Q	I	L	S	Q	P	H	R	P	T	A	V	F	C	G	G	D	I	M	A	M	G	A	L	C	A	A	D	E	M	G	L	R	V	P	Q	D	V	S	L	I	G	Y	D	N	V	R	N	A	R	Y	F	T	P	A	L	T	T	I	H	Q	P	K	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	S	D	F	S	P	E	G	G	Y	A	A	T	C	Q	L	L	E	S	K	A	P	F	T	G	L	F	C	A	N	D	T	X	A	V	S	A	L	A	R	F	Q	Q	L	G	I	S	V	P	G	D	V	S	V	I	G	Y	D	D	D	Y	S	A	A	Y	A	A	P	A	L	T	S	V	H	I	P	T	A	E
Template Known Secondary structure						S	S															T				S					S	S														T	T			T	T	T	T										T	T	S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	E	T	A	F	N	M	L	L	D	R	I	V	N	K	R	E	E	P	Q	S	I	E	V	H	P	R	L	I	E	R	R	S	V	A	D
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		L	T	Q	N	A	V	R	W	L	I	N	Q	C	Y	G	T	K	W	.	E	I	F	R	E	F	P	V	T	V	S	X	R	A	S	V	A	R
Template Known Secondary structure																				.														S	S
Template Predicted Secondary structure																				.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions