Return to main results Retrieve Phyre Job Id

Job DescriptionP33234
Confidence90.92%DateThu Jan 5 11:51:34 GMT 2012
Rank167Aligned Residues43
% Identity5%Templated2d6ya1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160.........170.........180...
Predicted Secondary structure 












Query SS confidence 










































Query Sequence  YMLRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKL
Query Conservation            
   
        

  

   
 
   
 
 
Alig confidence 










































Template Conservation 
 

  

 

  
    
    
   

  



    
  
Template Sequence  EATKARIFEAAVAEFARHGIAGARIDRIAAEARANKQLIYAYY
Template Known Secondary structure 

TTTS

T

Template Predicted Secondary structure 










Template SS confidence 










































   7..10.........20.........30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions