Return to main results Retrieve Phyre Job Id

Job DescriptionP33234
Confidence38.55%DateThu Jan 5 11:51:34 GMT 2012
Rank495Aligned Residues45
% Identity16%Templated1jgsa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   176...180.........190.........200.........210.........220......
Predicted Secondary structure 












Query SS confidence 


















































Query Sequence  PSLLKKKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQSCGYNSTS
Query Conservation     
 
 

  
 
    
   

  
  

  
  

 


   

   
Alig confidence 


























......

















Template Conservation         
   


  
  

  
   ......       

    
    
Template Sequence  DRLLNEYLSPLDITAAQFKVLCSIRCA. . . . . . ACITPVELKKVLSVDLGA
Template Known Secondary structure  TTTTS
......SSB
T

Template Predicted Secondary structure 




......






Template SS confidence 


















































   26...30.........40.........50.. .......60.........70
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions