 |
Job Description | P33234 | Confidence | 99.50% | Date | Thu Jan 5 11:51:34 GMT 2012 |
Rank | 11 | Aligned Residues | 52 |
% Identity | 17% | Template | d1bl0a2 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| AraC type transcriptional activator
|
Resolution | 2.30 |
|
  |   |
198 | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | M | R | Y | A | V | N | E | L | M | M | D | G | K | N | I | S | Q | V | S | Q | S | C | G | Y | N | S | T | S | Y | F | I | S | V | F | K | D | F | Y | G | M | T | P | L | H | Y | V | S | Q | H | R | E |
Query Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |
|
|
|   |   |   |
|
|   |   |   |
|   |
|
|
|   |
|
|   |   |   |
|   |
|
|   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |
|   |
|
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |
Template Sequence |   |
K | M | T | E | I | A | Q | K | L | K | E | S | N | E | P | I | L | Y | L | A | E | R | Y | G | F | E | S | Q | Q | T | L | T | R | T | F | K | N | Y | F | D | V | P | P | H | K | Y | R | M | T | N | M | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  | T |
| S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|