Job Description P33234 Confidence 90.46% Date Thu Jan 5 11:51:34 GMT 2012 Rank 186 Aligned Residues 44 % Identity 11% Template c3s5rA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:transcriptional regulator tetr family; PDBTitle: crystal structure of a putative transcriptional regulator of the tetr2 family (syn_02108) from syntrophus aciditrophicus at 2.60 a3 resolution Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	M	L	R	N	C	V	S	D	S	V	Y	Q	I	I	E	S	D	I	H	K	D	W	N	L	S	M	V	A	S	C	L	C	L	S	P	S	L	L	K	K	K	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	T	R	E	L	L	L	D	A	A	T	T	L	F	A	E	Q	G	I	A	A	T	T	X	A	E	I	A	A	S	V	G	V	N	P	A	X	I	H	Y	Y	F	K
Template Known Secondary structure																					T	T	T									T	T	T											S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions