Return to main results Retrieve Phyre Job Id

Job DescriptionP33234
Confidence52.81%DateThu Jan 5 11:51:34 GMT 2012
Rank414Aligned Residues48
% Identity13%Templatec3go5A_
PDB info PDB header:gene regulationChain: A: PDB Molecule:multidomain protein with s1 rna-binding domains; PDBTitle: crystal structure of a multidomain protein with nucleic acid binding2 domains (sp_0946) from streptococcus pneumoniae tigr4 at 1.40 a3 resolution
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150........ .160.........170.........180...
Predicted Secondary structure 








.....








Query SS confidence 






















. . . . .
























Query Sequence  VSLMMYMLRNCVSDSVYQIIESD. . . . . IHKDWNLSMVASCLCLSPSLLKKKL
Query Conservation                 
   
   .....     

  

   
 
   
 
 
Alig confidence 






















.....
























Template Conservation 

             

  
    
     


 

 
   
  

  

 

Template Sequence  LKPRSFEXLENDAQXILTYLESNGGFXTLNDKSSPDDIKATFGISKGQFKKAL
Template Known Secondary structure 
S







TTTS

TTS
SS
Template Predicted Secondary structure 














Template SS confidence 




















































   213......220.........230.........240.........250.........260.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions