Job Description P33234 Confidence 49.13% Date Thu Jan 5 11:51:34 GMT 2012 Rank 431 Aligned Residues 74 % Identity 9% Template c3d6zA_ PDB info PDB header:transcription regulator/dna Chain: A: PDB Molecule:multidrug-efflux transporter 1 regulator; PDBTitle: crystal structure of r275e mutant of bmrr bound to dna and rhodamine Resolution 2.60 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.			.	.	.	.	.	.	.	.									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.					.	.									.	.	.	.	.	.	.	.
Query SS confidence																														.					.	.									.	.	.	.	.	.	.	.
Query Sequence		H	K	D	W	N	L	S	M	V	A	S	C	L	C	L	S	P	S	L	L	K	K	K	L	K	S	E	N	.	T	S	Y	S	.	.	Q	I	I	T	T	C	R	M	.	.	.	.	.	.	.	.	R	Y	A	V	N	E	L	M	M	D	G	K	N	I	S	Q	V	S	Q	S	C	G	Y	N	S	T	S	Y	F
Query Conservation																														.					.	.									.	.	.	.	.	.	.	.
Alig confidence																						.								.					.	.									.	.	.	.	.	.	.	.																										.
Template Conservation																						.																																																								.
Template Sequence		E	S	Y	Y	S	I	G	E	V	S	K	L	A	N	V	S	I	K	A	L	.	R	Y	Y	D	K	I	D	L	F	K	P	A	Y	V	D	P	D	T	S	Y	R	Y	Y	T	D	S	Q	L	I	H	L	D	L	I	K	S	L	K	Y	I	G	T	P	L	E	E	M	K	K	A	Q	D	L	E	M	.	E	E	L
Template Known Secondary structure			S												T							.						T	T	S	S			S				T	T	T							T	G	G	G	G											T	T												S		S	.	S
Template Predicted Secondary structure																						.																																																								.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80
		229	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	V	F	K	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	F	Y	T	E	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions