Return to main results Retrieve Phyre Job Id

Job DescriptionP33234
Confidence60.95%DateThu Jan 5 11:51:34 GMT 2012
Rank368Aligned Residues57
% Identity11%Templatec2kpjA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:sos-response transcriptional repressor, lexa; PDBTitle: solution structure of protein sos-response transcriptional2 repressor, lexa from eubacterium rectale. northeast3 structural genomics consortium target err9a
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.........170.........180.........190.......
Predicted Secondary structure 



















Query SS confidence 



























































Query Sequence  LMMYMLRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTC
Query Conservation               
   
        

  

   
 
   
 
 

  
 
    
   
Alig confidence 



















...




































Template Conservation 
            
  

  ...   

  

   


  


  
 
   
    
  
Template Sequence  MVKDKQKAIFSENLNSYIAK. . . SEKTQLEIAKSIGVSPQTFNTWCKGIAIPRMGKVQAL
Template Known Secondary structure 



TT...SSS
T

TTS



Template Predicted Secondary structure 


...






Template SS confidence 



























































   1........10.........20 .........30.........40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions