 |
Job Description | P33234 | Confidence | 89.07% | Date | Thu Jan 5 11:51:34 GMT 2012 |
Rank | 216 | Aligned Residues | 41 |
% Identity | 5% | Template | c1rktA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:protein yfir; |
PDBTitle: crystal structure of yfir, a putative transcriptional regulator from2 bacillus subtilis
|
Resolution | 1.95 Å |
|
  |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | N | C | V | S | D | S | V | Y | Q | I | I | E | S | D | I | H | K | D | W | N | L | S | M | V | A | S | C | L | C | L | S | P | S | L | L | K | K | K | L | K |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|   |
|   |   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|   |
Template Sequence |   |
Q | A | E | I | L | E | A | A | K | T | V | F | K | R | K | G | F | E | L | T | T | X | K | D | V | V | E | E | S | G | F | S | R | G | G | V | Y | L | Y | F | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | T | T |
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  | T | T |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|