Job Description P21156 Confidence 99.00% Date Thu Jan 5 11:37:52 GMT 2012 Rank 41 Aligned Residues 165 % Identity 12% Template c3q4gA_ PDB info PDB header:ligase Chain: A: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: structure of nad synthetase from vibrio cholerae Resolution 2.40 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																				.	.																											.	.	.	.	.	.	.
Query SS confidence																				.	.																											.	.	.	.	.	.	.
Query Sequence		R	Q	L	E	A	E	S	I	H	I	I	R	E	V	A	A	E	F	.	.	S	N	P	V	M	L	Y	S	I	G	K	D	S	S	V	M	L	H	L	A	R	K	A	F	Y	P	.	.	.	.	.	.	.	G	T	L	P	F	P	L	L	H	V	D	T	G	W	K	F	R	E	M	Y	E	F	R	D	R	T	A
Query Conservation																				.	.																											.	.	.	.	.	.	.
Alig confidence																				.	.																											.	.	.	.	.	.	.														.
Template Conservation																																																																				.
Template Sequence		Q	F	E	I	E	R	R	V	A	F	I	K	R	K	L	T	E	A	R	Y	K	S	L	V	L	G	I	S	G	G	V	D	S	T	T	C	G	R	L	A	Q	L	A	V	E	E	L	N	Q	Q	H	N	T	T	E	Y	Q	F	I	A	V	R	L	P	Y	G	.	E	Q	K	D	E	D	E	A	Q	L	A	L	S
Template Known Secondary structure																				T										S	S																					T	T		S											S	S	.	S		S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		K	A	Y	G	C	E	L	L	V	H	K	N	P	.	.	.	.	.	.	.	.	.	.	.	.	E	G	V	A	M	G	I	N	P	F	V	H	G	S	A	K	H	T	D	.	.	.	.	.	I	M	K	T	E	G	L	K	Q	A	L	N	K	Y	G	F	D	A	A	F	G	G	A	R	R	D	E	E	K	S	R
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.																							.
Template Conservation																																																																									.
Template Sequence		F	I	R	P	T	H	S	V	S	V	N	I	K	A	G	V	D	G	L	H	A	A	S	H	H	A	L	A	N	T	G	L	I	P	S	D	P	A	K	V	D	F	I	K	G	N	V	K	A	R	A	R	X	V	A	Q	Y	E	I	A	G	Y	V	G	G	L	V	L	G	T	D	.	H	S	A	E	N	I	T	G
Template Known Secondary structure						S																										T		S		S	S																												T				B				.								T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	E	R	I	Y	S	F	R	D	R	F	H	R	W	D	P	K	N	Q	R	P	E	L	W	H	N	Y	N	G	Q	I	N	K	G	E	S	I	R	V	F	P	L	S	N	W	T	E	Q	D	I	W	Q	Y	I	W	L	E	N	I	D
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Y	T	K	F	G	D	G	A	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	P	L	F	G	L	N	K	R	Q	V	R	L	L	A	K	T	L	G	A	P
Template Known Secondary structure			S		T	T	T	T	T			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		T	T	T	T													T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.																													.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions