Job Description P21156 Confidence 100.00% Date Thu Jan 5 11:37:52 GMT 2012 Rank 5 Aligned Residues 236 % Identity 21% Template c2wsiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:fad synthetase; PDBTitle: crystal structure of yeast fad synthetase (fad1) in complex2 with fad Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.											.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure															.											.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence															.											.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	H	L	R	Q	L	E	A	E	S	I	H	.	I	I	R	E	V	A	A	E	F	S	.	.	.	.	N	P	V	M	L	Y	S	I	G	K	D	S	S	V	M	L	H	L	A	R	K	A	F	Y	P	.	.	.	.	.	.	.	.	.	.	G	T	L	P	F	P	L	L	H	V	D	T	G	W	K	F	R
Query Conservation															.											.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Alig confidence															.											.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	S	T	Q	E	A	I	R	L	T	R	K	Y	L	L	S	E	I	F	V	R	W	S	P	L	N	G	E	I	S	F	S	Y	N	G	G	K	D	C	Q	V	L	L	L	L	Y	L	S	C	L	W	E	Y	F	F	I	K	A	Q	N	S	F	P	M	Q	R	L	P	T	V	F	I	D	Q	E	E	T	F	P
Template Known Secondary structure																			T	T	T	T	T	S		S	S	S	S	S							S																																								T	T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		E	M	Y	E	F	R	D	R	T	A	K	A	Y	G	C	E	L	L	V	H	K	N	P	E	G	V	A	M	G	I	N	P	F	V	H	G	S	A	K	H	T	D	I	M	K	T	E	G	L	K	Q	A	L	N	K	Y	.	G	F	D	A	A	F	G	G	A	R	R	D	E	E	K	S	R	A	K	E	R	I	Y
Query Conservation																																																										.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	E	N	F	V	L	E	T	S	E	R	Y	C	L	S	L	Y	E	S	Q	R	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	D	A	F	R	D	F	I	K	I	Y	P	E	T	E	A	I	V	I	G	I	R	H	T	D	P	F	G	E	A	L	K	P	I	Q
Template Known Secondary structure														T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T												S	S	S						S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		S	F	R	D	R	F	H	R	W	D	P	K	N	Q	R	P	E	L	W	H	N	Y	N	G	Q	I	N	K	G	E	S	I	R	V	F	P	L	S	N	W	T	E	Q	D	I	W	Q	Y	I	W	L	E	N	I	D	I	V	P	L	Y	L	A	A	E	R	P	V	L	E	R	D	G	M	L	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	S	N	W	P	D	F	M	R	L	Q	P	L	L	H	W	D	L	T	N	I	W	S	F	L	L	Y	S	N	E	P	I	C	G	L	Y	G	K	G	F	T	S	I	G	G	I	N	N	S	L	P	N	P	H	L	R
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S		S						T	T	T	T																	B						T	T		S	S				T	T	T	B		S		G	G	G	B
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180																							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	I	D	D	N	R	I	D	L	Q	P	G	E	V	I	K	K	R	M	V	R	F	R	T	L	G	C	W	P	L	T	G	A	V	E	S	N	A	Q	T	L	P	E	I	I	E	E	M	L	V	S	T	T	S	E	R	Q	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	S	N	N	P	A	L	H	F	E	W	E	I	I	H	A	F	G	K	D	R	S	S	A	I	N	T	S	P	I	S	V	V	D	K	E	R	F	S	K	Y	N	Y	Y	P	G	W	Y	L	V	D	D	T	L	E	R	A	G	R
Template Known Secondary structure		G	G	G						S							T		T	T	T			T	T				B											T	T	T			B			G	G	G				G	G	G	T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions