Job Description P21156 Confidence 99.41% Date Thu Jan 5 11:37:52 GMT 2012 Rank 38 Aligned Residues 184 % Identity 17% Template c2vxoB_ PDB info PDB header:ligase Chain: B: PDB Molecule:gmp synthase [glutamine-hydrolyzing]; PDBTitle: human gmp synthetase in complex with xmp Resolution 2.5 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	L	E	A	E	S	I	H	I	I	R	E	V	A	A	E	F	S	N	P	V	M	L	Y	S	I	G	K	D	S	S	V	M	L	H	L	A	R	K	A	F	Y	P	G	T	L	P	F	P	L	L	H	V	D	T	G	W	K	F	R	E	M	Y	E	F	R	D	R	T	A	K	A	Y	G	C	E	L	L
Query Conservation
Alig confidence																				.																									.	.
Template Conservation																				.																									.	.
Template Sequence		V	Q	N	R	E	L	E	C	I	R	E	I	K	E	R	V	G	T	.	S	K	V	L	V	L	L	S	G	G	V	D	S	T	V	C	T	A	L	L	N	R	A	L	.	.	N	Q	E	Q	V	I	A	V	H	I	D	N	G	F	M	R	K	R	E	S	Q	S	V	E	E	A	L	K	K	L	G	I	Q	V	K
Template Known Secondary structure																		T	T	.									S	S														S	.	.		T	T	T									S				T	T	T	T	T									T	T
Template Predicted Secondary structure																				.																									.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.											.	.	.	.	.										.	.																			.
Query SS confidence												.	.	.	.	.	.	.	.	.											.	.	.	.	.										.	.																			.
Query Sequence		V	H	K	N	P	E	G	V	A	M	.	.	.	.	.	.	.	.	.	G	I	N	P	F	V	H	G	S	A	.	.	.	.	.	K	H	T	D	I	M	K	T	E	.	.	G	L	K	Q	A	L	N	K	Y	G	F	D	A	A	F	G	G	A	.	R	R	D	E	E	K	S	R	A	K	E	R	I	Y	S	F
Query Conservation												.	.	.	.	.	.	.	.	.											.	.	.	.	.										.	.																			.
Alig confidence												.	.	.	.	.	.	.	.	.											.	.	.	.	.										.	.																			.
Template Conservation
Template Sequence		V	I	N	A	A	H	S	F	Y	N	G	T	T	T	L	P	R	I	S	K	T	L	N	M	T	T	S	P	E	E	K	R	K	I	I	G	D	T	F	V	K	I	A	N	E	V	I	G	E	M	N	L	K	P	E	E	V	F	L	A	Q	G	T	L	R	P	D	L	I	E	S	A	S	L	V	A	S	G	K	A
Template Known Secondary structure											T				B				B				G	G	G																										T	T			G	G	G								S	S			S	S									S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	R	F	H	R	W	D	P	K	N	Q	R	P	E	L	W	H	N	Y	N	G	Q	I	N	K	G	E	S	I	R	V	F	P	L	S	N	W	T	E	Q	D	I	W	Q	Y	I	W	L	E	N	I	D
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.
Template Sequence		E	L	I	K	T	H	H	N	D	T	E	L	I	R	K	L	R	E	.	.	.	.	.	.	.	.	.	E	G	K	V	I	E	P	L	K	D	F	H	K	D	E	V	R	I	L	G	R	E	L	G	L	P
Template Known Secondary structure			G	G	G	S			S	S										.	.	.	.	.	.	.	.	.	T	T					G	G	G	G	S												T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.										.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions